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GridApplicInterface Class Reference

Derived application interface class which spawns simulation codes using grid services such as Condor or Globus. More...

Inheritance diagram for GridApplicInterface:
SysCallApplicInterface ProcessApplicInterface ApplicationInterface Interface

Public Member Functions

 GridApplicInterface (const ProblemDescDB &problem_db)
 constructor
 
 ~GridApplicInterface ()
 destructor
 
void derived_map (const Variables &vars, const ActiveSet &set, Response &response, int fn_eval_id)
 Called by map() and other functions to execute the simulation in synchronous mode. The portion of performing an evaluation that is specific to a derived class.
 
void derived_map_asynch (const ParamResponsePair &pair)
 Called by map() and other functions to execute the simulation in asynchronous mode. The portion of performing an asynchronous evaluation that is specific to a derived class.
 
void wait_local_evaluation_sequence (PRPQueue &prp_queue)
 version of wait_local_evaluations() managing of set of individual asynchronous evaluations
 
void test_local_evaluation_sequence (PRPQueue &prp_queue)
 Convenience function for common code between wait and nowait case.
 
int synchronous_local_analysis (int analysis_id)
 
- Public Member Functions inherited from SysCallApplicInterface
 SysCallApplicInterface (const ProblemDescDB &problem_db)
 constructor
 
 ~SysCallApplicInterface ()
 destructor
 
- Public Member Functions inherited from ProcessApplicInterface
 ProcessApplicInterface (const ProblemDescDB &problem_db)
 constructor
 
 ~ProcessApplicInterface ()
 destructor
 
- Public Member Functions inherited from ApplicationInterface
 ApplicationInterface (const ProblemDescDB &problem_db)
 constructor
 
 ~ApplicationInterface ()
 destructor
 
- Public Member Functions inherited from Interface
 Interface ()
 default constructor More...
 
 Interface (ProblemDescDB &problem_db)
 standard constructor for envelope More...
 
 Interface (const Interface &interface_in)
 copy constructor More...
 
virtual ~Interface ()
 destructor
 
Interface operator= (const Interface &interface_in)
 assignment operator
 
virtual int minimum_points (bool constraint_flag) const
 returns the minimum number of points required to build a particular ApproximationInterface (used by DataFitSurrModels).
 
virtual int recommended_points (bool constraint_flag) const
 returns the recommended number of points required to build a particular ApproximationInterface (used by DataFitSurrModels).
 
virtual void active_model_key (const Pecos::ActiveKey &key)
 activate an approximation state based on its key
 
virtual void clear_model_keys ()
 reset initial state by removing all model keys for an approximation
 
virtual void approximation_function_indices (const SizetSet &approx_fn_indices)
 set the (currently active) approximation function index set
 
virtual void update_approximation (const Variables &vars, const IntResponsePair &response_pr)
 updates the anchor point for an approximation
 
virtual void update_approximation (const RealMatrix &samples, const IntResponseMap &resp_map)
 updates the current data points for an approximation
 
virtual void update_approximation (const VariablesArray &vars_array, const IntResponseMap &resp_map)
 updates the current data points for an approximation
 
virtual void append_approximation (const Variables &vars, const IntResponsePair &response_pr)
 appends a single point to an existing approximation
 
virtual void append_approximation (const RealMatrix &samples, const IntResponseMap &resp_map)
 appends multiple points to an existing approximation
 
virtual void append_approximation (const VariablesArray &vars_array, const IntResponseMap &resp_map)
 appends multiple points to an existing approximation
 
virtual void append_approximation (const IntVariablesMap &vars_map, const IntResponseMap &resp_map)
 appends multiple points to an existing approximation
 
virtual void replace_approximation (const IntResponsePair &response_pr)
 replace the response for a single point within an existing approximation
 
virtual void replace_approximation (const IntResponseMap &resp_map)
 replace responses for multiple points within an existing approximation
 
virtual void track_evaluation_ids (bool track)
 assigns trackEvalIds to activate tracking of evaluation ids within surrogate data, enabling id-based lookups for data replacement
 
virtual void build_approximation (const RealVector &c_l_bnds, const RealVector &c_u_bnds, const IntVector &di_l_bnds, const IntVector &di_u_bnds, const RealVector &dr_l_bnds, const RealVector &dr_u_bnds)
 builds the approximation
 
virtual void export_approximation ()
 export the approximation to disk
 
virtual void rebuild_approximation (const BitArray &rebuild_fns)
 rebuilds the approximation after a data update
 
virtual void pop_approximation (bool save_data)
 removes data from last append from the approximation
 
virtual void push_approximation ()
 retrieves approximation data from a previous state (negates pop)
 
virtual bool push_available ()
 queries the approximation for the ability to retrieve a previous increment
 
virtual void finalize_approximation ()
 finalizes the approximation by applying all trial increments
 
virtual void combine_approximation ()
 combine the current approximation with previously stored data sets
 
virtual void combined_to_active (bool clear_combined=true)
 promote the combined approximation to the currently active one
 
virtual void clear_inactive ()
 clear inactive approximation data
 
virtual bool advancement_available ()
 query for available advancements in approximation resolution controls
 
virtual bool formulation_updated () const
 query for change in approximation formulation
 
virtual void formulation_updated (bool update)
 assign an updated status for approximation formulation to force rebuild
 
virtual Real2DArray cv_diagnostics (const StringArray &metric_types, unsigned num_folds)
 approximation cross-validation quality metrics per response function
 
virtual RealArray challenge_diagnostics (const String &metric_type, const RealMatrix &challenge_pts)
 approximation challenge data metrics per response function
 
virtual void clear_current_active_data ()
 clears current data from an approximation interface
 
virtual void clear_active_data ()
 clears all data from an approximation interface
 
virtual SharedApproxDatashared_approximation ()
 retrieve the SharedApproxData within an ApproximationInterface
 
virtual std::vector< Approximation > & approximations ()
 retrieve the Approximations within an ApproximationInterface
 
virtual const Pecos::SurrogateData & approximation_data (size_t fn_index)
 retrieve the approximation data from a particular Approximation within an ApproximationInterface
 
virtual const RealVectorArray & approximation_coefficients (bool normalized=false)
 retrieve the approximation coefficients from each Approximation within an ApproximationInterface
 
virtual void approximation_coefficients (const RealVectorArray &approx_coeffs, bool normalized=false)
 set the approximation coefficients within each Approximation within an ApproximationInterface
 
virtual const RealVector & approximation_variances (const Variables &vars)
 retrieve the approximation variances from each Approximation within an ApproximationInterface
 
virtual const String2DArray & analysis_components () const
 retrieve the analysis components, if available
 
virtual void discrepancy_emulation_mode (short mode)
 set discrepancy emulation mode used for approximating response differences
 
IntResponseMap & response_map ()
 return rawResponseMap
 
void cache_unmatched_response (int raw_id)
 migrate an unmatched response record from rawResponseMap to cachedResponseMap
 
void cache_unmatched_responses ()
 migrate all remaining response records from rawResponseMap to cachedResponseMap
 
void assign_rep (std::shared_ptr< Interface > interface_rep)
 assign letter or replace existing letter with a new one More...
 
void assign_rep (Interface *interface_rep, bool ref_count_incr=false)
 assign letter or replace existing letter with a new one DEPRECATED, but left for library mode clients to migrate: transfers memory ownership to the contained shared_ptr; ref_count_incr is ignored More...
 
unsigned short interface_type () const
 returns the interface type
 
const String & interface_id () const
 returns the interface identifier
 
int evaluation_id () const
 returns the value of the (total) evaluation id counter for the interface
 
void fine_grained_evaluation_counters (size_t num_fns)
 set fineGrainEvalCounters to true and initialize counters if needed
 
void init_evaluation_counters (size_t num_fns)
 initialize fine grained evaluation counters, sizing if needed
 
void set_evaluation_reference ()
 set evaluation count reference points for the interface
 
void print_evaluation_summary (std::ostream &s, bool minimal_header, bool relative_count) const
 print an evaluation summary for the interface
 
bool multi_proc_eval () const
 returns a flag signaling the use of multiprocessor evaluation partitions
 
bool iterator_eval_dedicated_master () const
 returns a flag signaling the use of a dedicated master processor at the iterator-evaluation scheduling level
 
bool is_null () const
 function to check interfaceRep (does this envelope contain a letter?)
 
std::shared_ptr< Interfaceinterface_rep ()
 function to return the letter
 
void eval_tag_prefix (const String &eval_id_str, bool append_iface_id=true)
 set the evaluation tag prefix (does not recurse) More...
 

Protected Member Functions

bool grid_file_test (const String &root_file)
 test file(s) for existence based on root_file name
 
- Protected Member Functions inherited from SysCallApplicInterface
void wait_local_evaluation_sequence (PRPQueue &prp_queue)
 
void test_local_evaluation_sequence (PRPQueue &prp_queue)
 
int synchronous_local_analysis (int analysis_id)
 
void init_communicators_checks (int max_eval_concurrency)
 
void set_communicators_checks (int max_eval_concurrency)
 
void map_bookkeeping (pid_t pid, int fn_eval_id)
 bookkeeping of process and evaluation ids for asynchronous maps
 
pid_t create_evaluation_process (bool block_flag)
 Spawn the evaluation by managing the input filter, analysis drivers, and output filter. Called from derived_map() & derived_map_asynch().
 
- Protected Member Functions inherited from ProcessApplicInterface
void derived_map (const Variables &vars, const ActiveSet &set, Response &response, int fn_eval_id)
 Called by map() and other functions to execute the simulation in synchronous mode. The portion of performing an evaluation that is specific to a derived class.
 
void derived_map_asynch (const ParamResponsePair &pair)
 Called by map() and other functions to execute the simulation in asynchronous mode. The portion of performing an asynchronous evaluation that is specific to a derived class.
 
void wait_local_evaluations (PRPQueue &prp_queue)
 For asynchronous function evaluations, this method is used to detect completion of jobs and process their results. It provides the processing code that is specific to derived classes. This version waits for at least one completion.
 
void test_local_evaluations (PRPQueue &prp_queue)
 For asynchronous function evaluations, this method is used to detect completion of jobs and process their results. It provides the processing code that is specific to derived classes. This version is nonblocking and will return without any completions if none are immediately available.
 
const StringArray & analysis_drivers () const
 retrieve the analysis drivers specification for application interfaces
 
void file_cleanup () const
 
void file_and_workdir_cleanup (const bfs::path &params_path, const bfs::path &results_path, const bfs::path &workdir_path, const String &tag) const
 
void remove_params_results_files (const bfs::path &params_path, const bfs::path &results_path) const
 Remove (potentially autotagged for multiple programs) parameters and results files with passed root names.
 
void autotag_files (const bfs::path &params_path, const bfs::path &results_path, const String &eval_id_tag) const
 Utility to automatically tag parameters and results files with passed root names (the files may already need per-program tagging) More...
 
void wait_local_evaluation_batch (PRPQueue &prp_queue)
 batch version of wait_local_evaluations()
 
void test_local_evaluation_batch (PRPQueue &prp_queue)
 batch version of test_local_evaluations()
 
void synchronous_local_analyses (int start, int end, int step)
 execute analyses synchronously on the local processor More...
 
void define_filenames (const String &eval_id_tag)
 define modified filenames from user input by handling Unix temp file and optionally tagging with given eval_id_tag
 
void write_parameters_files (const Variables &vars, const ActiveSet &set, const Response &response, const int id)
 write the parameters data and response request data to one or more parameters files (using one or more invocations of write_parameters_file()) in either standard or aprepro format
 
void read_results_files (Response &response, const int id, const String &eval_id_tag)
 read the response object from one or more results files using full eval_id_tag passed
 
bfs::path get_workdir_name ()
 construct a work directory name (tmp or named), with optional tag
 
void prepare_process_environment ()
 set PATH, environment variables, and change directory prior to fork/system/spawn More...
 
void reset_process_environment ()
 reset PATH and current directory after system/spawn (workdir case) More...
 
- Protected Member Functions inherited from ApplicationInterface
void init_communicators (const IntArray &message_lengths, int max_eval_concurrency)
 allocate communicator partitions for concurrent evaluations within an iterator and concurrent multiprocessor analyses within an evaluation.
 
void set_communicators (const IntArray &message_lengths, int max_eval_concurrency)
 set the local parallel partition data for an interface (the partitions are already allocated in ParallelLibrary).
 
void init_serial ()
 
int asynch_local_evaluation_concurrency () const
 return asynchLocalEvalConcurrency
 
short interface_synchronization () const
 return interfaceSynchronization
 
bool evaluation_cache () const
 return evalCacheFlag
 
bool restart_file () const
 return evalCacheFlag
 
String final_eval_id_tag (int fn_eval_id)
 form and return the final evaluation ID tag, appending iface ID if needed
 
void map (const Variables &vars, const ActiveSet &set, Response &response, bool asynch_flag=false)
 Provides a "mapping" of variables to responses using a simulation. Protected due to Interface letter-envelope idiom. More...
 
void manage_failure (const Variables &vars, const ActiveSet &set, Response &response, int failed_eval_id)
 manages a simulation failure using abort/retry/recover/continuation
 
const IntResponseMap & synchronize ()
 executes a blocking schedule for asynchronous evaluations in the beforeSynchCorePRPQueue and returns all jobs More...
 
const IntResponseMap & synchronize_nowait ()
 executes a nonblocking schedule for asynchronous evaluations in the beforeSynchCorePRPQueue and returns a partial set of completed jobs More...
 
void serve_evaluations ()
 run on evaluation servers to serve the iterator master More...
 
void stop_evaluation_servers ()
 used by the iterator master to terminate evaluation servers More...
 
bool check_multiprocessor_analysis (bool warn)
 checks on multiprocessor analysis configuration
 
bool check_asynchronous (bool warn, int max_eval_concurrency)
 checks on asynchronous configuration (for direct interfaces)
 
bool check_multiprocessor_asynchronous (bool warn, int max_eval_concurrency)
 checks on asynchronous settings for multiprocessor partitions
 
String final_batch_id_tag ()
 form and return the final batch ID tag
 
void master_dynamic_schedule_analyses ()
 blocking dynamic schedule of all analyses within a function evaluation using message passing More...
 
void serve_analyses_synch ()
 serve the master analysis scheduler and manage one synchronous analysis job at a time More...
 
- Protected Member Functions inherited from Interface
 Interface (BaseConstructor, const ProblemDescDB &problem_db)
 constructor initializes the base class part of letter classes (BaseConstructor overloading avoids infinite recursion in the derived class constructors - Coplien, p. 139) More...
 
 Interface (NoDBBaseConstructor, size_t num_fns, short output_level)
 constructor initializes the base class part of letter classes (NoDBBaseConstructor used for on the fly instantiations without a DB)
 
void init_algebraic_mappings (const Variables &vars, const Response &response)
 Define algebraicACVIndices, algebraicACVIds, and algebraicFnIndices.
 
void asv_mapping (const ActiveSet &total_set, ActiveSet &algebraic_set, ActiveSet &core_set)
 define the evaluation requirements for algebraic_mappings() (algebraic_set) and the core Application/Approximation mapping (core_set) from the total Interface evaluation requirements (total_set)
 
void asv_mapping (const ActiveSet &algebraic_set, ActiveSet &total_set)
 map an algebraic ASV back to original total ordering for asynch recovery
 
void algebraic_mappings (const Variables &vars, const ActiveSet &algebraic_set, Response &algebraic_response)
 evaluate the algebraic_response using the AMPL solver library and the data extracted from the algebraic_mappings file
 
void response_mapping (const Response &algebraic_response, const Response &core_response, Response &total_response)
 combine the response from algebraic_mappings() with the response from derived_map() to create the total response More...
 

Protected Attributes

IntSet idSet
 Set of function evaluation id's for active asynchronous system call evaluations.
 
IntShortMap failCountMap
 map linking function evaluation id's to number of response read failures
 
start_grid_computing_t start_grid_computing
 handle to dynamically linked start_grid_computing function
 
perform_analysis_t perform_analysis
 handle to dynamically linked perform_analysis grid function
 
get_jobs_completed_t get_jobs_completed
 handle to dynamically linked get_jobs_completed grid function
 
stop_grid_computing_t stop_grid_computing
 handle to dynamically linked stop_grid_computing function
 
- Protected Attributes inherited from ProcessApplicInterface
bool fileTagFlag
 flags tagging of parameter/results files
 
bool fileSaveFlag
 flags retention of parameter/results files
 
bool commandLineArgs
 flag indicating use of passing of filenames as command line arguments to the analysis drivers and input/output filters
 
bool apreproFlag
 flag indicating use of the APREPRO (the Sandia "A PRE PROcessor" utility) format for parameter files
 
unsigned short resultsFileFormat
 results file format
 
bool multipleParamsFiles
 flag indicating the need for separate parameters files for multiple analysis drivers
 
std::string iFilterName
 the name of the input filter (input_filter user specification)
 
std::string oFilterName
 the name of the output filter (output_filter user specification)
 
std::vector< String > programNames
 the names of the analysis code programs (analysis_drivers user specification)
 
std::string specifiedParamsFileName
 the name of the parameters file from user specification
 
std::string paramsFileName
 the parameters file name actually used (modified with tagging or temp files); only valid from define_filenames to write_parameters_files
 
std::string paramsFileWritten
 actual, qualified name of the params file written, possibly with workdir
 
std::string specifiedResultsFileName
 the name of the results file from user specification
 
std::string resultsFileName
 the results file name actually used (modified with tagging or temp files); only valid from define_filenames to write_parameters_files
 
std::string resultsFileWritten
 actual, qualified name of the results file written, possibly with workdir
 
std::string fullEvalId
 complete evalIdTag, possibly including hierarchical tagging and final eval id, but not program numbers, for passing to write_parameters_files
 
bool allowExistingResults
 by default analysis code interfaces delete results files if they exist; user may override with this flag and we'll try to gather and only fork if needed
 
std::map< int, PathTriplefileNameMap
 Maps function evaluation ID to triples (parameters, results, and workdir) paths used in spawning function evaluations. Workdir will be empty if not created specifically for this eval.
 
bool useWorkdir
 whether to use a work_directory
 
std::string workDirName
 work_directory name, if specified...
 
bool dirTag
 whether to tag the working directory
 
bool dirSave
 whether dir_save was specified
 
bfs::path curWorkdir
 active working directory for this evaluation; valid only from define_filenames to create_evaluation_process
 
bfs::path createdDir
 non-empty if created for this eval; valid only from define_filenames to write_parameters_files
 
StringArray linkFiles
 template directory (if specified)
 
StringArray copyFiles
 template files (if specified)
 
bool templateReplace
 whether to replace existing files
 
- Protected Attributes inherited from ApplicationInterface
ParallelLibraryparallelLib
 reference to the ParallelLibrary object used to manage MPI partitions for the concurrent evaluations and concurrent analyses parallelism levels
 
bool batchEval
 flag indicating usage of batch evaluation facilities, where a set of jobs is launched and scheduled as a unit rather than individually
 
bool asynchFlag
 flag indicating usage of asynchronous evaluation
 
int batchIdCntr
 maintain a count of the batches
 
bool suppressOutput
 flag for suppressing output on slave processors
 
int evalCommSize
 size of evalComm
 
int evalCommRank
 processor rank within evalComm
 
int evalServerId
 evaluation server identifier
 
bool eaDedMasterFlag
 flag for dedicated master partitioning at ea level
 
int analysisCommSize
 size of analysisComm
 
int analysisCommRank
 processor rank within analysisComm
 
int analysisServerId
 analysis server identifier
 
int numAnalysisServers
 current number of analysis servers
 
bool multiProcAnalysisFlag
 flag for multiprocessor analysis partitions
 
bool asynchLocalAnalysisFlag
 flag for asynchronous local parallelism of analyses
 
int asynchLocalAnalysisConcurrency
 limits the number of concurrent analyses in asynchronous local scheduling and specifies hybrid concurrency when message passing
 
int asynchLocalEvalConcSpec
 user specification for asynchronous local evaluation concurrency
 
int asynchLocalAnalysisConcSpec
 user specification for asynchronous local analysis concurrency
 
int numAnalysisDrivers
 the number of analysis drivers used for each function evaluation (from the analysis_drivers interface specification)
 
IntSet completionSet
 the set of completed fn_eval_id's populated by wait_local_evaluations() and test_local_evaluations()
 
String failureMessage
 base message for managing failed evals; will be followed with more details in screen output
 
- Protected Attributes inherited from Interface
unsigned short interfaceType
 the interface type: enum for system, fork, direct, grid, or approximation
 
String interfaceId
 the interface specification identifier string from the DAKOTA input file
 
bool algebraicMappings
 flag for the presence of algebraic_mappings that define the subset of an Interface's parameter to response mapping that is explicit and algebraic.
 
bool coreMappings
 flag for the presence of non-algebraic mappings that define the core of an Interface's parameter to response mapping (using analysis_drivers for ApplicationInterface or functionSurfaces for ApproximationInterface).
 
short outputLevel
 output verbosity level: {SILENT,QUIET,NORMAL,VERBOSE,DEBUG}_OUTPUT
 
int currEvalId
 identifier for the current evaluation, which may differ from the evaluation counters in the case of evaluation scheduling; used on iterator master as well as server processors. Currently, this is set prior to all invocations of derived_map() for all processors.
 
bool fineGrainEvalCounters
 controls use of fn val/grad/hess counters for detailed evaluation report
 
int evalIdCntr
 total interface evaluation counter
 
int newEvalIdCntr
 new (non-duplicate) interface evaluation counter
 
int evalIdRefPt
 iteration reference point for evalIdCntr
 
int newEvalIdRefPt
 iteration reference point for newEvalIdCntr
 
IntArray fnValCounter
 number of value evaluations by resp fn
 
IntArray fnGradCounter
 number of gradient evaluations by resp fn
 
IntArray fnHessCounter
 number of Hessian evaluations by resp fn
 
IntArray newFnValCounter
 number of new value evaluations by resp fn
 
IntArray newFnGradCounter
 number of new gradient evaluations by resp fn
 
IntArray newFnHessCounter
 number of new Hessian evaluations by resp fn
 
IntArray fnValRefPt
 iteration reference point for fnValCounter
 
IntArray fnGradRefPt
 iteration reference point for fnGradCounter
 
IntArray fnHessRefPt
 iteration reference point for fnHessCounter
 
IntArray newFnValRefPt
 iteration reference point for newFnValCounter
 
IntArray newFnGradRefPt
 iteration reference point for newFnGradCounter
 
IntArray newFnHessRefPt
 iteration reference point for newFnHessCounter
 
IntResponseMap rawResponseMap
 Set of responses returned by either a blocking or nonblocking schedule. More...
 
IntResponseMap cachedResponseMap
 Set of available asynchronous responses completed within a blocking or nonblocking scheduler that cannot be processed in a higher level context and need to be stored for later.
 
StringArray fnLabels
 response function descriptors (used in print_evaluation_summary() and derived direct interface classes); initialized in map() functions due to potential updates after construction
 
bool multiProcEvalFlag
 flag for multiprocessor evaluation partitions (evalComm)
 
bool ieDedMasterFlag
 flag for dedicated master partitioning at the iterator level
 
String evalTagPrefix
 set of period-delimited evaluation ID tags to use in evaluation tagging
 
bool appendIfaceId
 whether to append the interface ID to the prefix during map (default true)
 
String2DArray analysisComponents
 Analysis components for interface types that support them.
 

Detailed Description

Derived application interface class which spawns simulation codes using grid services such as Condor or Globus.

This class is currently a modified copy of SysCallApplicInterface adapted for use with an external grid dervices library which was dynamically linked using dlopen() services.

Member Function Documentation

◆ synchronous_local_analysis()

int synchronous_local_analysis ( int  analysis_id)
inlinevirtual

This code provides the derived function used by ApplicationInterface::serve_analyses_synch().

TODO - allow local analyses?????

Reimplemented from ApplicationInterface.

References SysCallApplicInterface::spawn_analysis_to_shell().


The documentation for this class was generated from the following files: