Dakota
Version 6.19
Explore and Predict with Confidence
|
The derived input file database utilizing the new IDR parser. More...
Public Member Functions | |
NIDRProblemDescDB (ParallelLibrary ¶llel_lib) | |
constructor | |
~NIDRProblemDescDB () | |
destructor | |
void | derived_parse_inputs (const std::string &dakota_input_file, const std::string &dakota_input_string, const std::string &parser_options) |
parses the input file and populates the problem description database using NIDR. More... | |
void | derived_broadcast () |
perform any data processing that must be coordinated with DB buffer broadcasting (performed prior to broadcasting the DB buffer on rank 0 and after receiving the DB buffer on other processor ranks) | |
void | derived_post_process () |
perform any additional data post-processing | |
KWH (iface_Real) | |
KWH (iface_Rlit) | |
KWH (iface_false) | |
KWH (iface_ilit) | |
KWH (iface_int) | |
KWH (iface_lit) | |
KWH (iface_start) | |
KWH (iface_stop) | |
KWH (iface_str) | |
KWH (iface_str2D) | |
KWH (iface_strL) | |
KWH (iface_true) | |
KWH (iface_type) | |
KWH (method_Ii) | |
KWH (method_Real) | |
KWH (method_Real01) | |
KWH (method_RealDL) | |
KWH (method_RealLlit) | |
KWH (method_Realp) | |
KWH (method_Realz) | |
KWH (method_Ri) | |
KWH (method_false) | |
KWH (method_szarray) | |
KWH (method_ilit2) | |
KWH (method_ilit2p) | |
KWH (method_int) | |
KWH (method_ivec) | |
KWH (method_lit) | |
KWH (method_litc) | |
KWH (method_liti) | |
KWH (method_litp) | |
KWH (method_litr) | |
KWH (method_litz) | |
KWH (method_order) | |
KWH (method_num_resplevs) | |
KWH (method_piecewise) | |
KWH (method_resplevs) | |
KWH (method_resplevs01) | |
KWH (method_shint) | |
KWH (method_sizet) | |
KWH (method_slit2) | |
KWH (method_start) | |
KWH (method_stop) | |
KWH (method_str) | |
KWH (method_strL) | |
KWH (method_true) | |
KWH (method_tr_final) | |
KWH (method_type) | |
KWH (method_usharray) | |
KWH (method_ushint) | |
KWH (method_utype) | |
KWH (method_augment_utype) | |
KWH (method_utype_lit) | |
KWH (model_Real) | |
KWH (model_RealDL) | |
KWH (model_ivec) | |
KWH (model_false) | |
KWH (model_int) | |
KWH (model_lit) | |
KWH (model_order) | |
KWH (model_shint) | |
KWH (model_sizet) | |
KWH (model_id_to_index_set) | |
KWH (model_start) | |
KWH (model_stop) | |
KWH (model_str) | |
KWH (model_strL) | |
KWH (model_true) | |
KWH (model_type) | |
KWH (model_usharray) | |
KWH (model_ushint) | |
KWH (model_utype) | |
KWH (model_augment_utype) | |
KWH (resp_RealDL) | |
KWH (resp_RealL) | |
KWH (resp_false) | |
KWH (resp_intset) | |
KWH (resp_ivec) | |
KWH (resp_lit) | |
KWH (resp_sizet) | |
KWH (resp_start) | |
KWH (resp_stop) | |
KWH (resp_str) | |
KWH (resp_strL) | |
KWH (resp_true) | |
KWH (resp_utype) | |
KWH (resp_augment_utype) | |
KWH (env_int) | |
KWH (env_start) | |
KWH (env_str) | |
KWH (env_strL) | |
KWH (env_true) | |
KWH (env_utype) | |
KWH (env_augment_utype) | |
KWH (var_RealLb) | |
KWH (var_RealUb) | |
KWH (var_IntLb) | |
KWH (var_categorical) | |
KWH (var_caulbl) | |
KWH (var_dauilbl) | |
KWH (var_dauslbl) | |
KWH (var_daurlbl) | |
KWH (var_ceulbl) | |
KWH (var_deuilbl) | |
KWH (var_deuslbl) | |
KWH (var_deurlbl) | |
KWH (var_sizet) | |
KWH (var_start) | |
KWH (var_stop) | |
KWH (var_str) | |
KWH (var_strL) | |
KWH (var_true) | |
KWH (var_newiarray) | |
KWH (var_newsarray) | |
KWH (var_newivec) | |
KWH (var_newrvec) | |
KWH (var_ivec) | |
KWH (var_svec) | |
KWH (var_rvec) | |
KWH (var_type) | |
Public Member Functions inherited from ProblemDescDB | |
ProblemDescDB () | |
default constructor More... | |
ProblemDescDB (ParallelLibrary ¶llel_lib) | |
standard constructor More... | |
ProblemDescDB (const ProblemDescDB &db) | |
copy constructor More... | |
~ProblemDescDB () | |
destructor More... | |
ProblemDescDB | operator= (const ProblemDescDB &db) |
assignment operator More... | |
void | parse_inputs (ProgramOptions &prog_opts, DbCallbackFunctionPtr callback=NULL, void *callback_data=NULL) |
Parses the input file or input string if present and executes callbacks. Does not perform any validation. More... | |
void | check_and_broadcast (const ProgramOptions &prog_opts) |
performs check_input, broadcast, and post_process, but for now, allowing separate invocation through the public API as well More... | |
void | check_input () |
verifies that there is at least one of each of the required keywords in the dakota input file More... | |
void | broadcast () |
invokes send_db_buffer() and receive_db_buffer() to broadcast DB data across the processor allocation. Used by manage_inputs(). | |
void | post_process () |
post-processes the (minimal) input specification to assign default variables/responses specification arrays. Used by manage_inputs(). More... | |
void | lock () |
Locks the database in order to prevent data access when the list nodes may not be set properly. Unlocked by a set nodes operation. | |
void | unlock () |
Explicitly unlocks the database. Use with care. | |
void | set_db_list_nodes (const String &method_tag) |
set dataMethodIter based on a method identifier string to activate a particular method specification in dataMethodList and use pointers from this method specification to set all other list iterators. | |
void | set_db_list_nodes (size_t method_index) |
set dataMethodIter based on an index within dataMethodList to activate a particular method specification and use pointers from this method specification to set all other list iterators. | |
void | resolve_top_method (bool set_model_nodes=true) |
For a (default) environment lacking a top method pointer, this function is used to determine which of several potential method specifications corresponds to the top method and then sets the list nodes accordingly. | |
void | set_db_method_node (const String &method_tag) |
set dataMethodIter based on a method identifier string to activate a particular method specification (only). | |
void | set_db_method_node (size_t method_index) |
set dataMethodIter based on an index within dataMethodList to activate a particular method specification (only). | |
size_t | get_db_method_node () |
return the index of the active node in dataMethodList | |
void | set_db_model_nodes (const String &model_tag) |
set the model list iterators (dataModelIter, dataVariablesIter, dataInterfaceIter, and dataResponsesIter) based on the model identifier string | |
void | set_db_model_nodes (size_t model_index) |
set the model list iterators (dataModelIter, dataVariablesIter, dataInterfaceIter, and dataResponsesIter) based on an index within dataModelList | |
size_t | get_db_model_node () |
return the index of the active node in dataModelList | |
void | set_db_variables_node (const String &variables_tag) |
set dataVariablesIter based on the variables identifier string | |
void | set_db_interface_node (const String &interface_tag) |
set dataInterfaceIter based on the interface identifier string | |
void | set_db_responses_node (const String &responses_tag) |
set dataResponsesIter based on the responses identifier string | |
ParallelLibrary & | parallel_library () const |
return the parallelLib reference | |
IteratorList & | iterator_list () |
return a list of all Iterator objects that have been instantiated | |
ModelList & | model_list () |
return a list of all Model objects that have been instantiated | |
VariablesList & | variables_list () |
return a list of all Variables objects that have been instantiated | |
InterfaceList & | interface_list () |
return a list of all Interface objects that have been instantiated | |
ResponseList & | response_list () |
return a list of all Response objects that have been instantiated | |
const RealMatrixArray & | get_rma (const String &entry_name) const |
get a RealMatrixArray out of the database based on an identifier string | |
const RealVector & | get_rv (const String &entry_name) const |
get a RealVector out of the database based on an identifier string | |
const IntVector & | get_iv (const String &entry_name) const |
get an IntVector out of the database based on an identifier string | |
const BitArray & | get_ba (const String &entry_name) const |
get a BitArray out of the database based on an identifier string | |
const SizetArray & | get_sza (const String &entry_name) const |
get an SizetArray out of the database based on an identifier string | |
const UShortArray & | get_usa (const String &entry_name) const |
get an UShortArray out of the database based on an identifier string | |
const RealSymMatrix & | get_rsm (const String &entry_name) const |
get a RealSymMatrix out of the database based on an identifier string | |
const RealVectorArray & | get_rva (const String &entry_name) const |
get a RealVectorArray out of the database based on an identifier string | |
const IntVectorArray & | get_iva (const String &entry_name) const |
get an IntVectorArray out of the database based on an identifier string | |
const IntSet & | get_is (const String &entry_name) const |
get an IntSet out of the database based on an identifier string | |
const IntSetArray & | get_isa (const String &entry_name) const |
get an IntSetArray out of the database based on an identifier string | |
const SizetSet & | get_szs (const String &entry_name) const |
get a SizetSet out of the database based on an identifier string | |
const StringSetArray & | get_ssa (const String &entry_name) const |
get an StringSetArray out of the database based on an identifier string | |
const RealSetArray & | get_rsa (const String &entry_name) const |
get a RealSetArray out of the database based on an identifier string | |
const IntRealMapArray & | get_irma (const String &entry_name) const |
get an IntRealMapArray out of the database based on an identifier string | |
const StringRealMapArray & | get_srma (const String &entry_name) const |
get an StringRealMapArray out of the database based on an identifier string | |
const RealRealMapArray & | get_rrma (const String &entry_name) const |
get a RealRealMapArray out of the database based on an identifier string | |
const RealRealPairRealMapArray & | get_rrrma (const String &entry_name) const |
get a RealRealPairRealMapArray out of the database based on an identifier string | |
const IntIntPairRealMapArray & | get_iirma (const String &entry_name) const |
get an IntIntPairRealMapArray out of the database based on an identifier string | |
const StringArray & | get_sa (const String &entry_name) const |
get a StringArray out of the database based on an identifier string | |
const String2DArray & | get_s2a (const String &entry_name) const |
get a String2DArray out of the database based on an identifier string | |
const String & | get_string (const String &entry_name) const |
get a String out of the database based on an identifier string | |
const Real & | get_real (const String &entry_name) const |
get a Real out of the database based on an identifier string | |
int | get_int (const String &entry_name) const |
get an int out of the database based on an identifier string | |
short | get_short (const String &entry_name) const |
get a short out of the database based on an identifier string | |
unsigned short | get_ushort (const String &entry_name) const |
get an unsigned short out of the database based on an identifier string | |
size_t | get_sizet (const String &entry_name) const |
get a size_t out of the database based on an identifier string | |
bool | get_bool (const String &entry_name) const |
get a bool out of the database based on an identifier string | |
void ** | get_voidss (const String &entry_name) const |
for getting a void**, e.g., &dlLib More... | |
void | insert_node (const DataEnvironment &data_env) |
set the DataEnvironment object | |
void | insert_node (const DataMethod &data_method) |
add a DataMethod object to the dataMethodList | |
void | insert_node (const DataModel &data_model) |
add a DataModel object to the dataModelList | |
void | insert_node (DataVariables &data_variables) |
add a DataVariables object to the dataVariablesList | |
void | insert_node (const DataInterface &data_interface) |
add a DataInterface object to the dataInterfaceList | |
void | insert_node (const DataResponses &data_responses) |
add a DataResponses object to the dataResponsesList | |
void | set (const String &entry_name, const RealVector &rv) |
set a RealVector within the database based on an identifier string | |
void | set (const String &entry_name, const IntVector &iv) |
set an IntVector within the database based on an identifier string | |
void | set (const String &entry_name, const BitArray &ba) |
set a BitArray within the database based on an identifier string | |
void | set (const String &entry_name, const RealSymMatrix &rsm) |
set a RealMatrix within the database based on an identifier string | |
void | set (const String &entry_name, const RealVectorArray &rva) |
set a RealVectorArray within the database based on an identifier string | |
void | set (const String &entry_name, const IntVectorArray &iva) |
set an IntVectorArray within the database based on an identifier string | |
void | set (const String &entry_name, const IntSetArray &isa) |
set an IntSetArray within the database based on an identifier string | |
void | set (const String &entry_name, const RealSetArray &rsa) |
set a RealSetArray within the database based on an identifier string | |
void | set (const String &entry_name, const IntRealMapArray &irma) |
set an IntRealMapArray within the database based on an identifier string | |
void | set (const String &entry_name, const StringRealMapArray &srma) |
set a StringRealMapArray within the database based on an identifier string | |
void | set (const String &entry_name, const RealRealMapArray &rrma) |
set a RealRealMapArray within the database based on an identifier string | |
void | set (const String &entry_name, const RealRealPairRealMapArray &iirma) |
set a RealRealPairRealMapArray in the db based on an identifier string | |
void | set (const String &entry_name, const IntIntPairRealMapArray &iirma) |
set an IntIntPairRealMapArray in the db based on an identifier string | |
void | set (const String &entry_name, const StringArray &sa) |
set a StringArray within the database based on an identifier string | |
int | min_procs_per_ea () |
compute minimum evaluation partition size based on lower level overrides | |
int | max_procs_per_ea () |
compute maximum evaluation partition size based on lower level overrides and concurrency levels | |
int | min_procs_per_ie () |
compute minimum iterator partition size based on lower level overrides | |
int | max_procs_per_ie (int max_eval_concurrency) |
compute maximum iterator partition size based on lower level overrides and concurrency levels | |
bool | method_locked () const |
return methodDBLocked | |
bool | model_locked () const |
return modelDBLocked | |
bool | variables_locked () const |
return variablesDBLocked | |
bool | interface_locked () const |
return interfaceDBLocked | |
bool | responses_locked () const |
return responsesDBLocked | |
bool | is_null () const |
function to check dbRep (does this envelope contain a letter) | |
Static Public Member Functions | |
static void | botch (const char *fmt,...) |
print and error message and immediately abort | |
static void | check_variables (std::list< DataVariables > *) |
check each node in a list of DataVariables, first mapping DataVariables members back to flat NIDR arrays if needed. | |
static void | check_responses (std::list< DataResponses > *) |
static void | check_descriptor_format (const StringArray &labels) |
Validate format user-supplied descriptors. | |
static void | check_descriptors_for_repeats (const StringArray &labels) |
Ensure no response descriptors are repeated. | |
static void | check_descriptors_for_repeats (const StringArray &cd_labels, const StringArray &ddr_labels, const StringArray &ddsi_labels, const StringArray &ddss_labels, const StringArray &ddsr_labels, const StringArray &cs_labels, const StringArray &dsr_labels, const StringArray &dssi_labels, const StringArray &dsss_labels, const StringArray &dssr_labels, const StringArray &cau_labels, const StringArray &diau_labels, const StringArray &dsau_labels, const StringArray &drau_labels, const StringArray &ceu_labels, const StringArray &dieu_labels, const StringArray &dseu_labels, const StringArray &dreu_labels) |
Ensure no variable descriptors are repeated. | |
static void | make_variable_defaults (std::list< DataVariables > *) |
Bounds and initial point check and inferred bounds generation. More... | |
static void | make_response_defaults (std::list< DataResponses > *) |
static void | squawk (const char *fmt,...) |
print an error message and increment nerr, but continue | |
static void | warn (const char *fmt,...) |
print a warning | |
Static Public Member Functions inherited from ProblemDescDB | |
static int | min_procs_per_level (int min_procs_per_server, int pps_spec, int num_serv_spec) |
compute minimum partition size for a parallel level based on lower level overrides | |
static int | max_procs_per_level (int max_procs_per_server, int pps_spec, int num_serv_spec, short sched_spec, int asynch_local_conc, bool peer_dynamic_avail, int max_concurrency) |
compute maximum partition size for a parallel level based on lower level overrides | |
Static Public Attributes | |
static NIDRProblemDescDB * | pDDBInstance |
Pointer to the active object instance used within the static kwhandler functions in order to avoid the need for static data. Only initialized when parsing an input file; will be NULL for cases of direct DB population only. | |
static int | nerr = 0 |
number of parse error encountered | |
Static Private Member Functions | |
static void | check_variables_node (void *v) |
check a single variables node; input argument v is Var_Info* | |
static int | check_driver (const String &an_driver, const StringArray &link_files, const StringArray ©_files) |
tokenize and try to validate the presence of an analysis driver, potentially included in the linked or copied template files More... | |
Private Attributes | |
std::list< void * > | VIL |
List of Var_Info pointers, one per Variables instance. | |
Additional Inherited Members | |
Protected Member Functions inherited from ProblemDescDB | |
ProblemDescDB (BaseConstructor, ParallelLibrary ¶llel_lib) | |
constructor initializes the base class part of letter classes (BaseConstructor overloading avoids infinite recursion in the derived class constructors - Coplien, p. 139) More... | |
Protected Attributes inherited from ProblemDescDB | |
DataEnvironment | environmentSpec |
the environment specification (only one allowed) resulting from a call to environment_kwhandler() or insert_node() | |
std::list< DataMethod > | dataMethodList |
list of method specifications, one for each call to method_kwhandler() or insert_node() | |
std::list< DataModel > | dataModelList |
list of model specifications, one for each call to model_kwhandler() or insert_node() | |
std::list< DataVariables > | dataVariablesList |
list of variables specifications, one for each call to variables_kwhandler() or insert_node() | |
std::list< DataInterface > | dataInterfaceList |
list of interface specifications, one for each call to interface_kwhandler() or insert_node() | |
std::list< DataResponses > | dataResponsesList |
list of responses specifications, one for each call to responses_kwhandler() or insert_node() | |
size_t | environmentCntr |
counter for environment specifications used in check_input | |
The derived input file database utilizing the new IDR parser.
The NIDRProblemDescDB class is derived from ProblemDescDB for use by the NIDR parser in processing DAKOTA input file data. For information on modifying the NIDR input parsing procedures, refer to Dakota/docs/Dev_Spec_Change.dox. For more on the parsing technology, see "Specifying and Reading Program Input with NIDR" by David M. Gay (report SAND2008-2261P, which is available in PDF form as http://dakota.sandia.gov/papers/nidr08.pdf). Source for the routines declared herein is NIDRProblemDescDB.cpp, in which most routines are so short that a description seems unnecessary.
|
virtual |
parses the input file and populates the problem description database using NIDR.
Parse the input file using the Input Deck Reader (IDR) parsing system. IDR populates the IDRProblemDescDB object with the input file data.
Reimplemented from ProblemDescDB.
References Dakota::abort_handler(), NIDRProblemDescDB::botch(), ProblemDescDB::dataMethodList, DataMethodRep::dlDetails, DataMethodRep::dlLib, NIDRProblemDescDB::nerr, ProblemDescDB::parallel_library(), NIDRProblemDescDB::pDDBInstance, and NIDRProblemDescDB::squawk().
|
staticprivate |
tokenize and try to validate the presence of an analysis driver, potentially included in the linked or copied template files
returns 1 if not found, 2 if found, but not executable, 0 if found (no error) in case we want to return to error on not found...
References WorkdirHelper::find_driver(), NIDRProblemDescDB::squawk(), WorkdirHelper::tokenize_driver(), NIDRProblemDescDB::warn(), and WorkdirHelper::which().
|
static |
Bounds and initial point check and inferred bounds generation.
Size arrays for contiguous storage of aggregated uncertain types. For each variable type, call Vgen_* to generate inferred bounds and initial point, repairing initial if needed.
size the aggregate arrays for uncertain (design and state are stored separately
References Dakota::DesignAndStateLabelsCheck, NIDRProblemDescDB::squawk(), Dakota::var_mp_drange, Dakota::VLUncertainInt, Dakota::VLUncertainReal, and Dakota::VLUncertainStr.
Referenced by NIDRProblemDescDB::derived_post_process().